相关文献:
1. Hsieh S.-T., Zhang L., Ye D.-W., Huang X.*, Cheng Y.-C.*, “A Theoretical Study on the Dynamics of Light Harvesting in the Dimeric Photosystem II Core Complex: Regulation and Robustness of Energy Transfer Pathways”, Faraday Discussions, 216, 94-115 (2019)
2. Chen X., Song J., Chen Z.-N., Jin T., Long F., Xie H., Zheng Y.,* Zhuang W.,* Zhang L.*, “Rational Designing of 8-Hydroxyquinolin-Imidazolinone-Based Fluorescent Protein Mutants with Dramatically Red: A Computational Study”, J. Comput. Chem., 39, 2307–2315 (2018)
3. Molodtsov, V., Sineva, E., Zhang, L., Huang, X., Cashel, M., Ades, S. E., Murakami, K. S., “Allosteric effector ppGpp potentiates the inhibition of transcript initiation by DksA”, Molecular Cell, 69 (5), 828 (2018)
4. Chevalier, A., Silva, D. A., Rocklin, G. J., Hicks D. R., Vergara R., Murapa P., Bernard S. M., Zhang, L., Lam K. H., Yao G., Bahl C.D., Miyashita S.I., Goreshnik I., Fuller J.T., Koday M.T., Jenkins C. M., Colvin T., Carter L., Bohn A., Bryan C.M., Fernández-Velasco D. A., Stewart L., Dong M., Huang, X., Jin, R., Wilson, I. A., Fuller, D. H., Baker, D., “Massively parallel de novo protein design for targeted therapeutics”, Nature, 550, 74-79, (2017)
5. Feng, Y.#, Zhang, L.#, Wu, S., Liu, Z., Gao, X., Zhang, X., Liu, M., Liu, J., Huang, X., Wang, W., “Conformational Dynamics of apo-GlnBP Revealed by Experimental and Computational Analysis”, Angew. Chem. Int. Ed. 55 (45), 13990–13994 (2016)
6. Zhang, L., Pardo-Avila, F., Unarta, C. I., Cheung, P.-H. P., Wang, G., Wang, D., and Huang, X., “Elucidation of the Dynamics of Transcription Elongation by RNA Polymerase II using Kinetic Network Models”, Acc. Chem. Res. 49 (4), 687–694 (2016)
7. Zhang, L., Silva, D.-A., Pardo-Avila, F., Wang, D., Huang, X., “Structural Model of RNA Polymerase II Elongation Complex with Complete Transcription Bubble Reveals NTP Entry Routes”, PLoS. Comp. Bio. 11, e1004354 (2015)
8. Zhang, L., Silva, D.-A., Yue, A., Zhang, H., Yan, Y.J., Huang, X., “Dynamic Protein Conformations Preferentially Drive Energy Transfer along Active Chain of the Photosystem-II Reaction Center”, Nature Communications 5, 4170 (2014)
9. Zhang, L., Silva, D.-A., Yan, Y.J., Huang, X., “Force Field Development for Cofactors in the Photosystem II”, J. Comput. Chem. 33 (25), 1969–1980 (2012)